PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_426605g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 235aa MW: 26596.7 Da PI: 7.0455 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 36.1 | 1.3e-11 | 195 | 226 | 1 | 29 |
---SS-EEEEEEE--TT-SS-E...EEEEE-S CS WRKY 1 ldDgynWrKYGqKevkgsefpr...sYYrCts 29 ldDgy+WrKYGqK+vk+s +pr +Y Ct+ MA_426605g0010 195 LDDGYKWRKYGQKVVKNSLHPRymnKYSECTY 226 59*******************95555777886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.3E-13 | 180 | 225 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.07E-10 | 187 | 226 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.771 | 190 | 216 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.1E-5 | 195 | 235 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-7 | 196 | 222 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
MMPSRETRHG VMDEANPRSS GCMQTAALTT FMEQQPMRVF QQLQLNAFPS YQLPSNEVLP 60 TMAQLEPPRG FISRADHHLN HSVSSCFDEK DDQFLMDEGS HLEAGGGYTH DDAQYTSLPG 120 CGLITSSSTQ PSNYSHHNFP GCTHQSASNT GDISPAARWE GSNSWPGSEK VKVKVKRKLR 180 EPRFCFQTRS DVDVLDDGYK WRKYGQKVVK NSLHPRYMNK YSECTYIESF ILFNA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 179 | KVKRKLR |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT117324 | 0.0 | BT117324.1 Picea glauca clone GQ03817_C13 mRNA sequence. |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44745.1 | 1e-24 | WRKY family protein |