PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_402393g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 379aa    MW: 42523.8 Da    PI: 4.7983
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_402393g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM271.3e-0871125148
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLp 48 
                     lp G++F+Ptd+el+ e+L+ k++ ++      ++++   i+   +i++++P++Lp
  MA_402393g0010  71 LPSGVKFDPTDQELI-EHLQGKISFDNstphplIDEFIPtIEGGdGICYTHPEKLP 125
                     699************.99****998886776443333333555545*********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.28E-1759158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MAGKYRNSTS SSQLIDAKLE EYRIKRCPAC GHQIEREELI DAKLEEYRIK RCPACGHQIE  60
REEALQDWPG LPSGVKFDPT DQELIEHLQG KISFDNSTPH PLIDEFIPTI EGGDGICYTH  120
PEKLPGREKT NWVMHQYHLG SQEEEKEGEL VVSKVFYQTQ PRQCNWEKAT DAGDTCKAGI  180
TEATQVPERF TAGENVSSTD RHIYSAHDPL EQQAKVTHSS HNLSLAQSRS ESSDQGIDSK  240
SPESTHCTPS SGDGIVDLHL NKDTHFVKPC DHCNNIITRE DRTACGSQEE PRDHLPNLHE  300
SHLTNLLFCH ETLQTGAVNS NAKFQRYGSL DLEDLAAELG LPLDQKTNSE IFADTVSVTK  360
EVQEALSNSQ EADWLQYFG
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1037250.0BT103725.1 Picea glauca clone GQ02801_D11 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5251585
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-36NAC domain containing protein 75