PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_381058g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 196aa MW: 22160.3 Da PI: 10.2804 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 53.6 | 4.5e-17 | 52 | 90 | 2 | 39 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkve 39 +Dg++WrKY qK + ++ prsYYrC++ gCpvkk+v MA_381058g0010 52 NDGCRWRKYEQKATRHNPRPRSYYRCAMVpGCPVKKQVR 90 8**************************999*******96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.7E-18 | 40 | 90 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.1E-16 | 43 | 92 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.028 | 46 | 89 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-11 | 51 | 102 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.0E-14 | 52 | 90 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence Send to blast |
MQSEQIDNGI NLSMHYSPCD HVESPNKKHQ ALSKGSKRIA SVRTRSETSV INDGCRWRKY 60 EQKATRHNPR PRSYYRCAMV PGCPVKKQVR FRPFPFRFRH FPVALDLTDN RPNSGLEFRP 120 PNLEACSFQQ SKPLALFDQN QYSSTMQEIV TSMKADPNFT AALAVAIAGS LLNLGTSIQK 180 MPKFPPAKQC IDGSTQ |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT110411 | 1e-108 | BT110411.1 Picea glauca clone GQ03221_F16 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A482CVK9 | 2e-55 | A0A482CVK9_9SPER; WRKY164 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68150.1 | 3e-19 | WRKY DNA-binding protein 9 |