PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_367366g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 159aa    MW: 17132.8 Da    PI: 4.4664
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_367366g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.84.7e-0710382755
             AP2 27 krkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ r slg+++t+e+Aa+a++ a  +l+g
  MA_367366g0010 10 IHGRLSLGSYDTPEKAARAYDFAVYCLRG 38
                    45799******************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103211.957146IPR001471AP2/ERF domain
SMARTSM003805.2E-5252IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.9E-131247IPR001471AP2/ERF domain
CDDcd000187.96E-141348No hitNo description
SuperFamilySSF541711.5E-91347IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MGVGNSNAQI HGRLSLGSYD TPEKAARAYD FAVYCLRGSK AKLNFPHTPP KIHCTSSLSP  60
PQIRASAAKF AAEEFRQLSE GDTAFSSCGS TFSSCGSSSE AECGDNEQEN WAEKGSAFWD  120
SVLLESLESG KSPNLNDFPP LDESLDYFGV HLEPTESLL
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0825937e-58EF082593.1 Picea sitchensis clone WS02718_F08 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NQM11e-48A9NQM1_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.12e-21ERF family protein