PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_363763g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 219aa    MW: 24588 Da    PI: 7.3369
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_363763g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.83.3e-07188212529
                     HHHHHHHHHHHHHHHHHHHHCTSCC CS
             HLH   5 hnerErrRRdriNsafeeLrellPk 29 
                     h  +Er+RR+++ + f+ Lr+l+P 
  MA_363763g0010 188 HVVAERKRREQMSDVFSALRTLVPV 212
                     8899********************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.667183219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-7183214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.07E-6187215No hitNo description
Gene3DG3DSA:4.10.280.105.3E-6187214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-4188212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MSSTTPSPNL LLGDIYKTCL NPIDCNIIDD YNVSEHDFMD PLTKWQADSF ESVAADYPCG  60
CFPASSNDLA SSDLLLQCQM DIDNGQPSVQ PEESVISVST EGIHSNWKRL GLSSDKRKSS  120
AFVEWKAIKP DLPCSCKPKK YSSLQKRCIC FLNDINNHKI LRPLRYVNNS GNPSMAVGNK  180
YDKLAIHHVV AERKRREQMS DVFSALRTLV PVNPKVSFW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191196ERKRRE