PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_32651g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 24533.7 Da PI: 4.6145 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.2 | 5.7e-20 | 25 | 73 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+Wv+eIr+p gkrkr++lg+f tae+Aa+a++ a+++l+g MA_32651g0010 25 YRGVRRRS-WGKWVSEIREP---GKRKRIWLGSFETAEMAARAYDVAALSLKG 73 9****887.**********9...557************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 4.71E-22 | 24 | 83 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-31 | 24 | 83 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.92 | 24 | 81 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.6E-35 | 24 | 87 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.1E-11 | 25 | 36 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.34E-32 | 25 | 83 | No hit | No description |
Pfam | PF00847 | 6.4E-13 | 25 | 73 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.1E-11 | 47 | 63 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MDGTGRSFDN GADGNRNHDA RPRTYRGVRR RSWGKWVSEI REPGKRKRIW LGSFETAEMA 60 ARAYDVAALS LKGKSALPNF PDSVHTLPRP SSLDPRDIQL AAAQAASELM QPMVSSNISS 120 WQPQDQNLFD SNNNVNSDSV SVSDHDHHEL STRPHGPFSL DEEFFDFDSP NWQMDMGADA 180 DFVLPPPLNC FDETRAYNYN SVDDLNGPDQ GISPWSDSF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 6e-18 | 14 | 81 | 4 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 28 | 47 | RRRSWGKWVSEIREPGKRKR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D6R4W1 | 4e-38 | A0A0D6R4W1_ARACU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32800.1 | 2e-37 | ERF family protein |