PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_31899g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | MYB_related | ||||||||
Protein Properties | Length: 79aa MW: 8851.27 Da PI: 8.1987 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22 | 3.7e-07 | 27 | 61 | 1 | 36 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRt 36 rg W+ +Ed +l ++v + G +W+ +a+ g ++ MA_31899g0010 27 RGFWSLDEDNKLTNYVMRNGLTgCWNYVAKQAG--KS 61 799*****************999********98..44 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.3E-5 | 22 | 67 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.8E-6 | 23 | 57 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 0.00623 | 30 | 69 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence Send to blast |
MGCTVGQPQG VLEGEVVLPT ASKPKLRGFW SLDEDNKLTN YVMRNGLTGC WNYVAKQAGK 60 SIISLIFYFF FAQFNIIEV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08500.1 | 3e-09 | myb domain protein 83 |