PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_317126g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 498aa MW: 54814.2 Da PI: 7.1033 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.4 | 6.1e-09 | 298 | 342 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h + ErrRR++++++fe Lr l+P+ + + +K +iL eY+ sL MA_317126g0010 298 HMISERRRREKMKESFEALRLLIPPgS------RKDKTSILSYMREYLTSL 342 7889********************955......666777777777777666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.491 | 293 | 342 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.10E-8 | 295 | 343 | No hit | No description |
SuperFamily | SSF47459 | 7.07E-14 | 296 | 365 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.7E-13 | 298 | 363 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.2E-6 | 298 | 342 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.3E-7 | 299 | 348 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 498 aa Download sequence Send to blast |
MVRCRVPGLA LNQPPYVWLT ANELLRFSSD ESQGEFYRVA GIQVSVYTAL AVSDNWQDPL 60 NSLWFTAVFI PCGNGVVELG TTNLVQADEQ NKLRVRSLLT SVIMSTNISV PMPGTSISTS 120 SCSSLLARSI DSPGTSSMVS YVQYPTKTPD DQINIPQDNP QYSTSASDLA SGFYPYLQSF 180 QLPSSSGLLI TDHDHETTLV YPGSSQQISV PALLITPQTS QASDFPVVPP ERSMMPSAFG 240 MWRLPSKVLT PPMVEGQYRI KRCLAILRNI HAERVRQTSI SGSYRSPGGT ISSGQVLHMI 300 SERRRREKMK ESFEALRLLI PPGSRKDKTS ILSYMREYLT SLKSRAEELE ETNKQLESEL 360 KRFTRAQSQE GAGTSAALQQ QGSTRTEGDD SVVTVEVSKM GGSSTGTTCD EMGLVVVVEK 420 PTNTIDLMIA LLKSLREMGV PLISMDTSTA HHENDPSRLQ FRMSATIKLQ DEDVERLKEA 480 LRSALSKGRG RPPPPPQI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 301 | 306 | ERRRRE |
2 | 302 | 307 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 1e-10 | bHLH family protein |