PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_3073g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 24426.6 Da PI: 6.5123 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.4e-18 | 6 | 53 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 +y+GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a+ + MA_3073g0010 6 RYRGVRQRH-WGSWVSEIRHP-----LlkTRVWLGTFETAEDAARAYDEAAILM 53 69******9.**********8.....334*********************9866 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.36E-32 | 5 | 66 | No hit | No description |
SMART | SM00380 | 1.3E-37 | 6 | 70 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.8E-32 | 6 | 64 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.745 | 6 | 64 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.3E-11 | 6 | 55 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.7E-18 | 6 | 65 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 3.5E-11 | 7 | 18 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-11 | 29 | 45 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0010143 | Biological Process | cutin biosynthetic process | ||||
GO:0010166 | Biological Process | wax metabolic process | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MSKPQRYRGV RQRHWGSWVS EIRHPLLKTR VWLGTFETAE DAARAYDEAA ILMCGPHHAK 60 TNFTYDRNAP PSIKPSFLSA ALTAKLRQCY LASLDMEMQQ GTASKDHMPS PVMTPSLTCL 120 KLDTEKSNLG IWQKKAGKQS ESNWVMTVEF GSCSDRYQQP SAVKQETEDD IALEMIEELF 180 HPTSIEFPSS KSDTPDVRNG ENVTELTVVK SEFPAVS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 4e-15 | 2 | 69 | 1 | 68 | ATERF1 |
3gcc_A | 4e-15 | 2 | 69 | 1 | 68 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT110788 | 1e-149 | BT110788.1 Picea glauca clone GQ03227_P10 mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024393916.1 | 2e-66 | ethylene-responsive transcription factor ERF003-like | ||||
Swissprot | Q9XI33 | 2e-48 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A9NPV7 | 1e-67 | A9NPV7_PICSI; Uncharacterized protein | ||||
STRING | PP1S79_25V6.1 | 4e-65 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 9e-41 | ERF family protein |