PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_3040g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | BES1 | ||||||||
Protein Properties | Length: 232aa MW: 24169.3 Da PI: 9.4121 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 156.3 | 2.2e-48 | 2 | 123 | 2 | 125 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 ++ r ptwkErEnnkrRERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw + + + g + + ss + sp +s++ s+ MA_3040g0010 2 TGSRLPTWKERENNKRRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWQGCPPPERMETGGASA--SMSPSSSYHPSPAASYHASP 96 57899******************************************************8777777776665555..55566666777777777788 PP DUF822 99 kssalaspvesysaspksssfpspssl 125 ss+++sp +sy+asp+sssfpsp + MA_3040g0010 97 ASSSFPSPGPSYQASPASSSFPSPGPS 123 888888888888888888888888653 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.3E-43 | 3 | 136 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
MTGSRLPTWK ERENNKRRER RRRAIAAKIY SGLRMYGNYK LPKHCDNNEV LKALCNEAGW 60 QGCPPPERME TGGASASMSP SSSYHPSPAA SYHASPASSS FPSPGPSYQA SPASSSFPSP 120 GPSYQDGYLI PWLKNLGVGG GGVGTGGSGR GLPPIGTSNS APVTPPLSSP TARGPRAMPD 180 WDALVKISAA AANENSSHCN GTGGAAVVTD DPAAAFCNAV SGWSSQQHHH XX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 3e-14 | 5 | 65 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 3e-14 | 5 | 65 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 3e-14 | 5 | 65 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 3e-14 | 5 | 65 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF678735 | 0.0 | EF678735.1 Picea sitchensis clone WS0297_M07 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009352718.1 | 2e-52 | PREDICTED: BES1/BZR1 homolog protein 4-like | ||||
Swissprot | Q9ZV88 | 3e-42 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | B8LS33 | 2e-95 | B8LS33_PICSI; Uncharacterized protein | ||||
STRING | XP_009352718.1 | 7e-52 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1595 | 15 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 3e-22 | BES1/BZR1 homolog 4 |