PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_290659g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 297aa MW: 33614.9 Da PI: 6.9441 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.4 | 6e-14 | 101 | 152 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +r+h+++Er+RR++++ +++ L++llP+ + +K s ++ +e+Av+Y+++L+ MA_290659g0010 101 KRKHKMIERQRRQDMKARLSILKSLLPHeN---LRGKRSVSDHVEEAVNYVHHLE 152 678*************************66...9*******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.281 | 99 | 151 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.1E-12 | 99 | 171 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.27E-14 | 100 | 168 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.9E-11 | 101 | 152 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.22E-12 | 101 | 156 | No hit | No description |
SMART | SM00353 | 2.1E-6 | 105 | 157 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence Send to blast |
MSSPSWLESE FLSCNDVIKE FDVENVLSSN PFLSTQPVED PSTYNTHHAK ICDSVDNFNS 60 GYLAGCPGHS NPVLMATFCD SSRPSDDQSR NILPGTLPSD KRKHKMIERQ RRQDMKARLS 120 ILKSLLPHEN LRGKRSVSDH VEEAVNYVHH LEKKVEDLQK EREKMKADSD KNAKVSVQGV 180 RLSCNKKFCL KAPAIGGSDR EFPTVKIKSM GSAVQVWTNT FEYQIVYSDL LMALEDGGLE 240 VVCATSSTIN NRVYHTIHSK VFDLNIFNID TLYQKVWHLI RTNHTQDQDS QTVDVQA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 111 | KRKHKMIERQRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | B8LNH5 | 1e-80 | B8LNH5_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP1638 | 8 | 38 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 5e-19 | bHLH family protein |