PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_2290g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 356aa    MW: 40202.1 Da    PI: 5.7494
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_2290g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.29.4e-2583142259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                   dDg++WrKYGqK++ gs++prsYYrCt++   gC++kk+v+r + d   +eitY g H ++
  MA_2290g0010  83 DDGHTWRKYGQKDILGSQHPRSYYRCTHKydmGCEAKKRVQRYD-DSPRFEITYIGFHVCQ 142
                   8***************************99999**********9.8999*********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-2477142IPR003657WRKY domain
SuperFamilySSF1182901.7E-2281143IPR003657WRKY domain
SMARTSM007741.9E-3482143IPR003657WRKY domain
PfamPF031061.4E-2383142IPR003657WRKY domain
PROSITE profilePS5081118.65983134IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MVRIGASSLE VSLAGRMTLE LGSACNGEES CSDVVAVGPP TQSEDQRPFS PYIHTDAAGK  60
SLHRWTVKVN AISTEAGNDV APDDGHTWRK YGQKDILGSQ HPRSYYRCTH KYDMGCEAKK  120
RVQRYDDSPR FEITYIGFHV CQIKPRLLEL QNSFRSPEIG PIAQRIAGNP FVFGSTSNPQ  180
PETSTLHDLS FAQIISRASR PLEDNELIPM LPYHPPELFP VNPRQGNPTM VSCRPPSLLQ  240
PKDEIVFTHF LPPEPQEFGE PGIGNFSQSF RFAPSGQNDL LQFMDTGERG NTSHEQLQRK  300
DLESEFTEVV YVQTCRADSP LLDMDLMFHT DLICRSFNWE TSIFHGTLRS RDVFFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-2183142969OsWRKY45
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.13e-24WRKY DNA-binding protein 30