PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_221221g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 182aa    MW: 20898.7 Da    PI: 7.7032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_221221g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.84e-08147755
                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    ++Er+RR++++  f++L +llP+ +     +K + +e + +A +Y+++Lq
  MA_221221g0010  1 MIERQRRKEMKVLFSRLISLLPEeN---LRGKRTVSEQVLEAENYVCHLQ 47
                    69*********************66...99*******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.3E-6161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.439146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-10162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.33E-5151No hitNo description
PfamPF000109.3E-5147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MIERQRRKEM KVLFSRLISL LPEENLRGKR TVSEQVLEAE NYVCHLQQKI EDLSAQREKM  60
KVNSGQNEKD SLEKFCNKTQ AFGGSDRQYP AVKINSVGSG VQIWTNTLEH EIVYSDIILA  120
LEEGGLEVVT AASSAINSRA YHTIHAKVFD LNIFNIRTLY QKLWHLISTH HTNDLWTTEA  180
RA
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF6773790.0EF677379.1 Picea sitchensis clone WS02766_M11 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LNH51e-104B8LNH5_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1638838
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25400.19e-22bHLH family protein