PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_214063g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 382aa    MW: 42976 Da    PI: 6.8417
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_214063g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.57.8e-194190255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr++  +g+WvAeIr+p++   r+r +lg+f ta+eAa a++aa+++l+g
  MA_214063g0010 41 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAQEAAMAYDAAARRLYG 90
                    69****999.**********965...5*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.86E-214099No hitNo description
Gene3DG3DSA:3.30.730.104.1E-3041100IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-204199IPR016177DNA-binding domain
PfamPF008471.8E-124190IPR001471AP2/ERF domain
PROSITE profilePS5103222.514198IPR001471AP2/ERF domain
SMARTSM003801.0E-3541104IPR001471AP2/ERF domain
PRINTSPR003679.2E-104253IPR001471AP2/ERF domain
PRINTSPR003679.2E-106480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MEKRSSPERR FDMRRATKVG TKAWKKGPTR GKGGPENATC EYRGVRQRTW GKWVAEIREP  60
KKRTRLWLGS FATAQEAAMA YDAAARRLYG PDAHLNLPEK YERSLYSPSS QGSHLLAHHA  120
SWYFPRGLLD HSRSRIPVIH PTFSSFSPAC PSAVTQRASC INLNVQPNVH HIHQKLQEMK  180
SRNEVRFPRL SMNDRFFMND QINASSTLLP QDIGQISTDL APRHLSSQEV AAAPQPGINT  240
DQENNSKGSI GSQQVDLREF LEQLGVIQAA SPPPPPPPPP PPAWDDADSE CTSIPISNTF  300
SPLPASSQDM VSFEEPLWDS IEIPLDFMET AFLLQNQYSQ VQVVEDQSFP VSIWDFQDPH  360
QQQQNCTEDH NSPPTNQLVP HS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-164298360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A4e-164298663ATERF1
3gcc_A4e-164298663ATERF1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00411DAPTransfer from AT3G57600Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.11e-38ERF family protein