PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_20468g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 243aa MW: 28003.4 Da PI: 7.5222 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92 | 4.7e-29 | 142 | 199 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYG+K vk+s++pr+YYrC+ ++C vkk ver+a+d+ +v++ Y g+Hnhe MA_20468g0010 142 EDGYKWRKYGKKFVKNSPNPRNYYRCSDSNCDVKKTVERDAHDKGIVITSYLGRHNHE 199 8********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.0E-30 | 129 | 201 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-26 | 133 | 201 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.7 | 136 | 201 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.6E-31 | 141 | 200 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-22 | 142 | 199 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
MANLVPTIGD FQAAFKVFRK EQAQQLQEAN CSQHMNEKAE AFEPSDFLDL EEDFNHSCKN 60 EDADDQAYNF NIVKTGPSIR REYADSFPSN PPCIRGLHLD HNSTVIQTHP QETMTPKKSR 120 KRKAERALKY AFLTRSETDI LEDGYKWRKY GKKFVKNSPN PRNYYRCSDS NCDVKKTVER 180 DAHDKGIVIT SYLGRHNHES PCVVYYIGKP ETLQLPCRPT ASPILQHISP VCSYVPESFE 240 QHQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-22 | 134 | 201 | 7 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D6R4C9 | 1e-51 | A0A0D6R4C9_ARACU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 2e-30 | WRKY DNA-binding protein 51 |