PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_19854g0020
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 188aa    MW: 20654.1 Da    PI: 5.3142
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_19854g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.85e-172372255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   ++kG+r++k +g+Wv+eIr p+    +  r++lg+++t+e+Aa+a++ a  +l+g
  MA_19854g0020 23 QFKGIRQRK-WGKWVSEIRMPN----SsVRIWLGSYDTPEKAARAYDFAVYSLKG 72
                   58******9.**********93....25*******************98888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541716.02E-202382IPR016177DNA-binding domain
CDDcd000184.31E-282382No hitNo description
PROSITE profilePS5103221.7072380IPR001471AP2/ERF domain
SMARTSM003807.4E-312386IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.7E-292381IPR001471AP2/ERF domain
PfamPF008473.9E-102471IPR001471AP2/ERF domain
PRINTSPR003673.4E-92435IPR001471AP2/ERF domain
PRINTSPR003673.4E-94662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MTKPSQNQSR HSSPESRSLK SGQFKGIRQR KWGKWVSEIR MPNSSVRIWL GSYDTPEKAA  60
RAYDFAVYSL KGSKAKLNFP YSPPKIPCSS SLSPSQIQVA TAKFAVEEFR LPSENCAASS  120
SFGFEVECNI DGQQITAEQG PAFQDSAPLG NLESGGSLNV EDIPPFDASM EDFGIVFQLT  180
EDWGLGVF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1620811173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022730709.11e-35ethylene-responsive transcription factor ERF017-like
SwissprotQ9C5912e-34ERF16_ARATH; Ethylene-responsive transcription factor ERF016
TrEMBLB8LPP61e-75B8LPP6_PICSI; Uncharacterized protein
STRINGAquca_076_00039.12e-36(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.18e-37ERF family protein