PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_19854g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 187aa MW: 20336.8 Da PI: 4.217 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28 | 5.7e-09 | 2 | 41 | 13 | 55 |
AP2 13 grWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +Wv+eIr + r++lg++ t+e+Aa a++ a +l+g MA_19854g0010 2 EKWVSEIRMlN-----SsGRIWLGSYHTPEKAACAYDFALYYLRG 41 59*******55.....349******************99999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 13.09 | 1 | 49 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-12 | 2 | 50 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 8.1E-17 | 2 | 50 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.0E-9 | 3 | 55 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.06E-14 | 3 | 51 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MEKWVSEIRM LNSSGRIWLG SYHTPEKAAC AYDFALYYLR GSKVKLNFLH SPPKIPYASS 60 LSPPQIQAAA AKFTSKEFRL PSDNSVASSS SGLEAECDID AQHITVEKVP AFPDSIPLES 120 LESGDPGGSL NVEDIPPLDV SMEDFGSLES GSPGESLNVE DIPPLDVSME DFGIVFHLME 180 HWGSGVF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001314662.1 | 1e-24 | ethylene-responsive transcription factor ERF017-like | ||||
Refseq | XP_012452676.1 | 9e-25 | PREDICTED: ethylene-responsive transcription factor ERF017-like | ||||
Refseq | XP_016682321.1 | 8e-25 | PREDICTED: ethylene-responsive transcription factor ERF017-like | ||||
TrEMBL | A9NK16 | 7e-47 | A9NK16_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G21960.1 | 2e-23 | ERF family protein |