PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_19630g0030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ZF-HD | ||||||||
Protein Properties | Length: 216aa MW: 22962.7 Da PI: 6.7369 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 107.2 | 9.9e-34 | 73 | 129 | 2 | 59 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 ++vrY+eClkNhAas+Ggha+DGCg+fmps ge+g+ +alkCaAC+CHRnFHRreve MA_19630g0030 73 KSVRYRECLKNHAASIGGHAIDGCGDFMPS-GEDGSLEALKCAACNCHRNFHRREVEG 129 679**************************9.999*********************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 1.0E-22 | 75 | 130 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 6.5E-31 | 75 | 127 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 5.8E-31 | 76 | 127 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 28.068 | 77 | 126 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MELGEHDGDM GVMALPMLYG GPAPNIHESS KLKPGENGTA GTGTPSDETR PSDHELLQHE 60 HHHHQQTVAP AKKSVRYREC LKNHAASIGG HAIDGCGDFM PSGEDGSLEA LKCAACNCHR 120 NFHRREVEGE PPCYYCYSPR SCGGRKRGAG PPMALLGPPA QQQHPINATP LALPPTSAHM 180 VARSLLQGAG DNDQDGSSSM RCCREPATTI KTEAAA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D6R164 | 1e-62 | A0A0D6R164_ARACU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP91 | 16 | 237 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02540.1 | 6e-31 | homeobox protein 21 |