PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_19488g0020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 154aa    MW: 17761.9 Da    PI: 5.3173
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_19488g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.91.3e-2932125295
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     pGfrF Pt+eelv +yLkk veg + l+++ +i+++d+y+++Pw+Lp  + +a+e++w+fF++rd+k+    r+nr tksgyWkatg+d++v ++
  MA_19488g0020  32 IPGFRFYPTEEELVGFYLKKCVEGGHrLNFDIIIPTLDLYQHDPWELPgLANDAKESQWFFFVPRDNKKC--PRPNRLTKSGYWKATGSDRAVRNE 125
                    69*********************9995666666***************556566888*********9975..6********************884 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.31731154IPR003441NAC domain
SuperFamilySSF1019415.62E-2932132IPR003441NAC domain
PfamPF023656.6E-1533120IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MEEMYGDGEI LGESTVIPGF RFYPTEEEST VIPGFRFYPT EEELVGFYLK KCVEGGHRLN  60
FDIIIPTLDL YQHDPWELPG LANDAKESQW FFFVPRDNKK CPRPNRLTKS GYWKATGSDR  120
AVRNELLLEG HRFRQSSSQR AASVHRSEEN SGVL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-213312519110NO APICAL MERISTEM PROTEIN
1ut4_B7e-213312519110NO APICAL MERISTEM PROTEIN
1ut7_A7e-213312519110NO APICAL MERISTEM PROTEIN
1ut7_B7e-213312519110NO APICAL MERISTEM PROTEIN
3swm_A8e-213312522113NAC domain-containing protein 19
3swm_B8e-213312522113NAC domain-containing protein 19
3swm_C8e-213312522113NAC domain-containing protein 19
3swm_D8e-213312522113NAC domain-containing protein 19
3swp_A8e-213312522113NAC domain-containing protein 19
3swp_B8e-213312522113NAC domain-containing protein 19
3swp_C8e-213312522113NAC domain-containing protein 19
3swp_D8e-213312522113NAC domain-containing protein 19
4dul_A7e-213312519110NAC domain-containing protein 19
4dul_B7e-213312519110NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
UniProtTranscription factor that acts as a floral repressor. Controls flowering time by negatively regulating CONSTANS (CO) expression in a GIGANTEA (GI)-independent manner. Regulates the plant cold response by positive regulation of the cold response genes COR15A and KIN1. May coordinate cold response and flowering time. {ECO:0000269|PubMed:17653269}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Circadian regulation with a peak of expression at dawn under continuous light conditions (PubMed:17653269). Circadian regulation with a peak of expression around dusk and lowest expression around dawn under continuous light conditions (at protein level) (PubMed:17653269). {ECO:0000269|PubMed:17653269}.
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006828987.11e-32NAC domain-containing protein 35
RefseqXP_009420148.14e-32PREDICTED: NAC domain-containing protein 35-like isoform X1
RefseqXP_020598401.17e-33NAC domain-containing protein 35-like, partial
RefseqXP_026406348.14e-32NAC domain-containing protein 35-like
RefseqXP_028555611.16e-33NAC domain-containing protein 35 isoform X2
SwissprotQ10S659e-31NAC22_ORYSJ; NAC domain-containing protein 22
SwissprotQ9ZVP81e-30NAC35_ARATH; NAC domain-containing protein 35
TrEMBLA0A075M5N54e-44A0A075M5N5_9SPER; NAC domain protein
STRINGERM964035e-32(Amborella trichopoda)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.11e-32NAC domain containing protein 35
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Okajima K
    Molecular mechanism of phototropin light signaling.
    J. Plant Res., 2016. 129(2): p. 149-57
    [PMID:26815763]
  3. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]
  4. Nakasone Y,Ohshima M,Okajima K,Tokutomi S,Terazima M
    Photoreaction Dynamics of LOV1 and LOV2 of Phototropin from Chlamydomonas reinhardtii.
    J Phys Chem B, 2018. 122(6): p. 1801-1815
    [PMID:29355019]