PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_182489g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family HRT-like
Protein Properties Length: 216aa    MW: 24338.3 Da    PI: 10.9556
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_182489g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like47.33.4e-15119149131
        HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     iCG++ +dG++C+++P k RKRC+ HKG +i
  MA_182489g0010 119 ICGALQGDGTICTATPLKNRKRCADHKGLKI 149
                     8***************************986 PP

2HRT-like53.34.5e-17182211231
        HRT-like   2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                     CGv+ledGs+Ck  P kgRKRC  HKGmRi
  MA_182489g0010 182 CGVLLEDGSICKIVPDKGRKRCNIHKGMRI 211
                     *****************************7 PP

Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000033Biological Processregulation of seed dormancy process
GO:0097100Molecular Functionsupercoiled DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MGTKAQAEKT EAQLLKVFDY AWNRGGNVAR RPHDVLLKLE KLSSQTMLES LRRLVVQKKW  60
LLFGKKVGIR IDGTKPANTE KVNKRNTLPR IIFGALTFSR NRPRSLSKNG SIDNKRKNIC  120
GALQGDGTIC TATPLKNRKR CADHKGLKIQ KEKKLSKINN INSNIVSSNQ GVEEHENEYT  180
YCGVLLEDGS ICKIVPDKGR KRCNIHKGMR ITSQAR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP52481420
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.12e-29effector of transcription2