PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_181986g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 453aa    MW: 50773.7 Da    PI: 6.5793
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_181986g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1071e-334599155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprl+Wt eLHerFv+av+qLGG++kAtPk+++++m+vkgLtl+h+kSHLQkYRl
  MA_181986g0010 45 KPRLKWTAELHERFVDAVSQLGGPDKATPKSVMRVMGVKGLTLYHLKSHLQKYRL 99
                    79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.04642102IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.8E-324399IPR009057Homeodomain-like
SuperFamilySSF466892.33E-164499IPR009057Homeodomain-like
TIGRFAMsTIGR015578.4E-2445100IPR006447Myb domain, plants
PfamPF002493.5E-94798IPR001005SANT/Myb domain
PfamPF143797.5E-23146192IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MEKMYQVKNT VSSNGSVPSH SERSLLLQGS NGPGEMGLVL STDPKPRLKW TAELHERFVD  60
AVSQLGGPDK ATPKSVMRVM GVKGLTLYHL KSHLQKYRLG KHLHMVVNLD NNKNGCSAAA  120
SKTSEMQGAS SAASSMIGAN KTDALQINEA VRMQFEVQRR LHEQIEVQQH LQLRIEAQGK  180
YLQSVLEKAR ETLAGHNLGS VGLEAARAEI SELASKVSSE CLNNAFSSLP EMPSLYKQQQ  240
HMVQAVHSLN QQSQVTDYSM ESCLTSNESS EKNLDRNMQN AGKKRLRTFQ NRNVPFWQTE  300
PREDASLREL SATQLSWEEN LKEDEKFLSS SANPKDSDRN SIPTKGNLRE RTTSFRVQTE  360
ENGYGMPDAR EKQMEVNGSC VGQVIKPEVS RSFSLQEVCQ KEFHRDEDES PSVSFNKLSK  420
LTEELDLNAN DDTSIASNCR EFDLNGYGWT YEH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A6e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B6e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A6e-1945102158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-1945102158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-1945102158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-1945102158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A6e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C6e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D6e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F6e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H6e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J6e-1945102259Protein PHOSPHATE STARVATION RESPONSE 1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1093820.0BT109382.1 Picea glauca clone GQ03207_M13 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP7817262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.31e-85G2-like family protein