PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_175506g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | NF-YA | ||||||||
Protein Properties | Length: 259aa MW: 29943.6 Da PI: 10.6455 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 30.5 | 1.2e-09 | 31 | 62 | 4 | 36 |
CBFB_NFYA 4 lYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 ++VNaKQy++IlkRR +R k e+++k + +r MA_175506g0010 31 VWVNAKQYRGILKRRLARLKWEQTRKK-TSQRE 62 79*********************8885.44443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51152 | 9.653 | 27 | 95 | IPR001289 | Nuclear transcription factor Y subunit A |
Pfam | PF02045 | 4.3E-8 | 31 | 70 | IPR001289 | Nuclear transcription factor Y subunit A |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MTMGQETLEP VETNDIGQVK IASSAKTRKW VWVNAKQYRG ILKRRLARLK WEQTRKKTSQ 60 RESTWVLRKK QHSNKSSLQV CGNKSKGKGK VIDDYALYSP TSTPLTWSSD LYVKELLKVK 120 ERLEVVEAKE LERDCTIHRI TAENQALAES NKVLKEKVSL LQEALRIGKT EWQRMKAEVQ 180 NMKKIAVENT ELMNAKPSQD KGKVVTQIDN NEKTSREERK GDSAKLSKTI LLRGKEKQTF 240 RLTTCKIEKA RKDRIEQQT |