PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_168025g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 509aa    MW: 56989.4 Da    PI: 8.5685
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_168025g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.16.8e-21173222255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     + +r++lg+++tae+Aa+a+++a+++++g
  MA_168025g0010 173 RYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTYDTAEDAARAYDNAALRFRG 222
                     7********.**********93....36*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.0E-33173232IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-23173232IPR016177DNA-binding domain
PROSITE profilePS5103225.739173230IPR001471AP2/ERF domain
PfamPF008472.5E-14173222IPR001471AP2/ERF domain
SMARTSM003801.0E-36173236IPR001471AP2/ERF domain
PRINTSPR003672.0E-11174185IPR001471AP2/ERF domain
CDDcd000189.30E-28181231No hitNo description
PRINTSPR003672.0E-11196212IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 509 aa     Download sequence    Send to blast
MEGKKQSSES STPKETTDPD RAGRIPGLRI ATATEEEMST IVQALIRVMH EGGDQAATQE  60
TCSESSTSMP DQPLTNISDG QKRSREEYGT CCNPGAETPK YSSSGSNNPR ETEMSNAKRS  120
SFRQITRARS HSSDAVAEAD QGEECREIKG QSTVAISDVP TSEQMKEATK RRRYRGVRQR  180
PWGKWAAEIR DPQKAARVWL GTYDTAEDAA RAYDNAALRF RGPRAKLNFP DEALARNQLA  240
DPINLPVMTE RTTQVAPAST ESLPLRPPSA FLHPTARFQH PSPTFTSINQ VEPFSFPRFR  300
SSQASLHLPL FSSPQYSMLS TRLEARPRQQ YVFSHQNQAI GLHPQAGSSI GITHPISLTS  360
SPTVWISGQP EQANLTMARE IEPRRFLLNP FEYTGTMFDR RHSNAPYELT RAIYPQQGMQ  420
RPRLPEGSET IYRQHYFIPT EGMQRPRLPE GSETMSRQQY FISTEGMQRP TLPEGLESST  480
ERRSQGRPNT FGQMDISSTT TTTTTPDIP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-22170230263ATERF1
3gcc_A2e-22170230263ATERF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.12e-25ERF family protein