PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_164675g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 357aa    MW: 39999.6 Da    PI: 8.9346
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_164675g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.21.2e-26162220259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg++WrKY qK++++++ prsYY+C+ a gCpvkk+v+r+aed ++v++tYe eH+h+
  MA_164675g0010 162 DDGCQWRKYAQKMIESNPLPRSYYKCAWApGCPVKKQVQRCAEDLTIVITTYEIEHTHS 220
                     8**************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.3E-30148220IPR003657WRKY domain
SuperFamilySSF1182904.84E-24155221IPR003657WRKY domain
PROSITE profilePS5081125.316156222IPR003657WRKY domain
SMARTSM007741.4E-29161221IPR003657WRKY domain
PfamPF031065.7E-24162219IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MLVAEINLIN KENLKLKSIL KLMNSKYNDL QMHNRSLIDQ RKGVDRNQIL NPDHQGNDVL  60
YARYSNGAVA SKDDQYWDCH ERGWEKEKKN GKFIDDQPLP SIKRTMNYLE SAQIDNRINS  120
CIDYSPRCHK KPPNKKHLSR GLAAVSKRVV STRTRSQPSM RDDGCQWRKY AQKMIESNPL  180
PRSYYKCAWA PGCPVKKQVQ RCAEDLTIVI TTYEIEHTHS LSPLAMAATH VGSSKQFIGE  240
EMIRENFVAD SQFVPCIARI STSSPFPTII LDLTENRPNT GLPLQPPHLA AGSFHHSIPF  300
PNNTGQDQLS IMQDYVASIK ADPNFAGAIA GCLLTLGVPV QGMPKSPPTT QCADGAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-18153221976Probable WRKY transcription factor 4
2lex_A1e-18153221976Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1161211e-124BT116121.1 Picea glauca clone GQ03712_D11 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A482CVK91e-132A0A482CVK9_9SPER; WRKY164
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.17e-39WRKY family protein