PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_156285g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 105aa    MW: 11661.1 Da    PI: 7.2616
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_156285g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.7e-1033721454
                    HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                    ++iN+ +++L++llP+ +  +++ K+  + +L ++++YIksL
  MA_156285g0010 33 QQINDLLSKLKSLLPEiC--ESNDKVPASKVLLETCNYIKSL 72
                    69***************9..9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.6E-91890IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.02E-101989IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.9371972IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00592978IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-73372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009416Biological Processresponse to light stimulus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
IAQQSRSTEN MSTEGSSRNR RSGRKQTSRV SDQQINDLLS KLKSLLPEIC ESNDKVPASK  60
VLLETCNYIK SLHREVDDLS EKLAELLANT EDGSAQAALI MSLLR
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic bHLH transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. May be involved in the control of lamina inclination through brassinosteroid signaling pathway (By similarity). {ECO:0000250}.
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of grain size. Binds the transcription repressor APG and forms a heterodimer of antagonistic bHLH transcription factors that regulates grain length and weight by controlling cell elongation in lemma and palea. May be involved in the control of lamina inclination through brassinosteroid signaling pathway. {ECO:0000269|PubMed:22363621}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009389574.12e-30PREDICTED: transcription factor ILI6-like
SwissprotB8APB51e-27ILI6_ORYSI; Transcription factor ILI6
SwissprotQ0DUR21e-27ILI6_ORYSJ; Transcription factor ILI6
TrEMBLM0S5Y25e-29M0S5Y2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P07410_0019e-30(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18771240
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-28bHLH family protein