PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_155093g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 456aa    MW: 51722 Da    PI: 6.0262
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_155093g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.31.5e-14253299354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h + Er+RR+ +N+++++Lr+l+P++     +K + a+i+  A++YIk+L
  MA_155093g0010 253 ANHFATERQRREYLNEKYQNLRTLVPNP-----TKADRASIVGDAIDYIKEL 299
                     68**************************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.707250299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-12253299IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.11E-15253317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.2E-14253311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.12E-11254304No hitNo description
SMARTSM003538.5E-12256305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MYDDYFDPQP GCNMLPADLS SSSAIMGLEE NLQRPLLRLP IFSPGENNFS DEAGMLGSDL  60
QQQLNFELEQ EYHSQIIQDV LQQQTNLHQE MCSAQQLPNN GSATASSWEA SFHEMQEITL  120
FQQQQQQNAL HIQDQGHHMS SFASSNASTS AYPAPELLEL LQLPRCSVPS SAISFSSNHP  180
QLSFNPPQPP LLRDMLHTLN SHNYQLNPSK PYFGMDEKEA ALQAEAEAGR QFTNSILDLK  240
RDMSLSKGEV RGANHFATER QRREYLNEKY QNLRTLVPNP TKADRASIVG DAIDYIKELL  300
RTVEEMKILV EQKRSSCIGR SKRHKISHDH VESSSQHESV LQCGQDQKFL TNGSLRSSWL  360
QRTSKDGTQV DVRIVDNEVN IKLIQRKRRS CLLSVSLVLH ELHLEILHAN GANIGEHYIF  420
MFNTKIYEGS CEYARSIATK LMDAVDKQLT YSILNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1384389QRKRRS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006854151.11e-114transcription factor bHLH91
RefseqXP_020528932.11e-114transcription factor bHLH91
TrEMBLU5D5K51e-113U5D5K5_AMBTC; Uncharacterized protein
STRINGERN156181e-113(Amborella trichopoda)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP26591431
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-52bHLH family protein