PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_148785g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 486aa MW: 55124.7 Da PI: 5.3043 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.2 | 1.7e-14 | 283 | 329 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR+ +N+++++Lr+l+P++ +K + a+i+ A++YIk+L MA_148785g0010 283 ANHFATERQRREYLNEKYQNLRTLVPNP-----TKADRASIVGDAIDYIKEL 329 68**************************.....9****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.707 | 280 | 329 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.9E-12 | 283 | 329 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.4E-14 | 283 | 341 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.22E-15 | 283 | 347 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.51E-11 | 284 | 334 | No hit | No description |
SMART | SM00353 | 8.5E-12 | 286 | 335 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0048658 | Biological Process | anther wall tapetum development | ||||
GO:0052543 | Biological Process | callose deposition in cell wall | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 486 aa Download sequence Send to blast |
DDAVQQFLQF LLGESLSWEA YNGPEDLFST MYDDYFDPQP GCNMLPADLS SSSAIMGLEE 60 NLQRPLLRLP IFSPGENNFS DEAGMLGSDL QQQLNFELEQ EYHSQIIQDV LQQQTNLHQE 120 MCSAQQLPNN GSATASSWEA SFHEMQEITL FQQQQQQNAL HIQDQGHHMS SFASSNASTS 180 AYPAPELLEL LQLPRCSVPS SAISFSSNHP QLSFNPPQPP LLRDMLHTLN SHNYQLNPSK 240 PYFGMDEKEA ALQAEAEAGR QFTNSILDLK RDMSLSKGEV RGANHFATER QRREYLNEKY 300 QNLRTLVPNP TKADRASIVG DAIDYIKELL RTVEEMKILV EQKRSSCIGR SKRHKISHDH 360 VESSSQHESV LQCGQDQKFL TNGSLRSSWL QRTSKDGTQV DVRIVDNEVN IKLIQRKRRS 420 CLLSVSLVLH ELHLEILHAN GANIGEHYIF MFNTKIYEGS CEYARSIATK LMDAVDKQLT 480 YSILNF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 414 | 419 | QRKRRS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006854151.1 | 1e-114 | transcription factor bHLH91 | ||||
Refseq | XP_020528932.1 | 1e-114 | transcription factor bHLH91 | ||||
TrEMBL | U5D5K5 | 1e-112 | U5D5K5_AMBTC; Uncharacterized protein | ||||
STRING | ERN15618 | 1e-113 | (Amborella trichopoda) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP2659 | 14 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 4e-52 | bHLH family protein |