PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_14480g0020
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 385aa    MW: 43268.1 Da    PI: 8.6627
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_14480g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.3e-30168226259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dg++WrKYGqK++++++ prsYYrC++a gC+vkk+v+r+a+dp++v+ tYegeH+h+
  MA_14480g0020 168 SDGCEWRKYGQKMIRNNQRPRSYYRCAMApGCSVKKQVQRCAQDPTIVIATYEGEHTHS 226
                    7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.5E-32156226IPR003657WRKY domain
SuperFamilySSF1182901.96E-26159227IPR003657WRKY domain
PROSITE profilePS5081126.888162228IPR003657WRKY domain
SMARTSM007748.1E-35167227IPR003657WRKY domain
PfamPF031061.1E-25169225IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MEGYKNQIAV IVAEIDRLND ENQKLKSMFK RMCCRYNHLQ KYIRSMLQQQ KEVDNSQIFN  60
RDHPREDILC ARSINVESSG AISHQSDEYW GGCEQEGGKE KKNVKFIDEQ QLPSKKRKNG  120
MINSSIAQME ESPNKKLEVL TRGSCKHTVA APKRIVSVRT TSEEALISDG CEWRKYGQKM  180
IRNNQRPRSY YRCAMAPGCS VKKQVQRCAQ DPTIVIATYE GEHTHSLSPL AMAYRNFSNQ  240
LISEGMNREN FIADNKLIPC IARLSTSSTI PTMTLDLTDS RLNRPGSLLQ RTHLAAGSFQ  300
ASTSLSNDMG QVFDHHNQLD NYSSIMQDYV ASVKADPNFT ASLAVAIAGS LVNLGAPVQV  360
MPKTPPASQL PDGSSQEEFV FTRYL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-22158227876Probable WRKY transcription factor 4
2lex_A4e-22158227876Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A482CVK91e-141A0A482CVK9_9SPER; WRKY164
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.15e-44WRKY family protein