PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_138256g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 441aa    MW: 48195.6 Da    PI: 5.8081
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_138256g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY941.1e-29226284259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC +kk+ver+++dp+++++tY+++Hnh+
  MA_138256g0010 226 SDHWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLAKKQVERDRTDPSMLIMTYTSDHNHT 284
                     69*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081131.973220286IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-30222286IPR003657WRKY domain
SuperFamilySSF1182903.4E-25223286IPR003657WRKY domain
SMARTSM007743.7E-34225285IPR003657WRKY domain
PfamPF031061.4E-24227283IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MDKEHDEGDL AAVVRASGVS TAYKWQTPHA FINGEGVRAT LITDLDTAPT LIAHSKSPEP  60
HVVLPNLSRN KSACMATPVD MQAAIVNPYY NRSLLMRYGS ASASSSCSSL FEIPGAPSLG  120
FFSTPIAEKS NPRKIEGMNH GLVCGAASSE ISRTPKVAEI SKKDETNSLA SPLVISRKVA  180
QGSSASSSSL APKASSSSKR KTQQKRTVCV PAAEGSNKPN GEDVPSDHWA WRKYGQKPIK  240
GSPYPRGYYR CSSSKGCLAK KQVERDRTDP SMLIMTYTSD HNHTWPTQRS SLAGSIRQSR  300
SIKSEEECPN QEVVGSKPDE NVDMHKSRQA DAVLNCFTSI MEPSKAAAED AGPPFNDERL  360
FNIHHDDEDI SGLPISISAL IQNDDFFADL PEPMNMFARQ FVDDQSYDDD DPDSTVVDPF  420
NLFNWSTNTM ATTFEEDKTT M
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B8e-19205287680Disease resistance protein RRS1
5w3x_D8e-19205287680Disease resistance protein RRS1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1110251e-111BT111025.1 Picea glauca clone GQ03231_H12 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.16e-43WRKY DNA-binding protein 35