PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_137415g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 332aa    MW: 37679.7 Da    PI: 8.6526
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_137415g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.54.5e-52101381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+ +yLkkk+++++l++  +i+e+d+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++ +
  MA_137415g0010  10 LPPGFRFHPTDEELILHYLKKKASSSPLPV-PIIAEIDLYKFDPWELPGKASFGEREWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKPIVLS 103
                     79****************************.88***************988899***************************************98 PP

             NAM  96 kgel..vglkktLvfykgrapkgektdWvmheyrl 128
                     ++++   g+kk Lvfy+gr pkg kt+W+mheyrl
  MA_137415g0010 104 ESTAipLGVKKALVFYRGRPPKGIKTSWIMHEYRL 138
                     5444459**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-644166IPR003441NAC domain
PROSITE profilePS5100561.67310166IPR003441NAC domain
PfamPF023654.7E-2711138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MTFLASNPQL PPGFRFHPTD EELILHYLKK KASSSPLPVP IIAEIDLYKF DPWELPGKAS  60
FGEREWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKPI VLSESTAIPL GVKKALVFYR  120
GRPPKGIKTS WIMHEYRLTD SGTSTTGLRK GSMRLDDWVL CRIYKKKNSN PRLTAAKERD  180
ESGMDDVLAT LPDIDQDQKP VLPKVASFTG LLDGEYPFLS CFLTDNPDYT GLASLPELES  240
FQNNSKREEY MNNNNITAKQ QSSTALSSID SKVLDSLKRT LSLGCMEEEP APAKRTNINN  300
YNNVPFFVNA FQPNQTYYQY PQKLMFNPLE DY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-761016915171Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1274279DSLKRT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family associated with male fertility. {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1017580.0BT101758.1 Picea glauca clone GQ01312_G20 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006841705.11e-105NAC transcription factor 56
SwissprotA2YMR02e-92NAC10_ORYSI; NAC transcription factor ONAC010
TrEMBLA0A411JJP01e-150A0A411JJP0_CUNLA; NAC domain-containing protein
STRINGERN033801e-105(Amborella trichopoda)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.17e-92NAC domain containing protein 25