PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_12161g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | G2-like | ||||||||
Protein Properties | Length: 398aa MW: 44611.4 Da PI: 10.109 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 56.2 | 7.6e-18 | 91 | 133 | 2 | 45 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 +r++Wt +LH++Fv+av+q G ++A+Pk+ile+m+++gLt+e+ MA_12161g0010 91 ARVHWTDQLHRKFVKAVDQT-GVDNAVPKRILEIMNIQGLTREN 133 69*****************9.********************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF52172 | 3.02E-6 | 1 | 53 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 5.1E-8 | 1 | 56 | No hit | No description |
PROSITE profile | PS50110 | 12.724 | 1 | 39 | IPR001789 | Signal transduction response regulator, receiver domain |
SuperFamily | SSF46689 | 1.4E-11 | 88 | 141 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.4E-17 | 89 | 141 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.9E-15 | 91 | 133 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence Send to blast |
MSANGDTNVV MRSITGGACN HLIKPIRMEE LRTIWQHVVR RHGQQNHRYK LEDNHRDLSG 60 HDRVSGESTA SKKRKHNSVQ FIQDINSLKT ARVHWTDQLH RKFVKAVDQT GVDNAVPKRI 120 LEIMNIQGLT RENKYRLYLK RLRGNIPEPR PVASFQAARD GKSGGTMQIR QRGKTSPSSS 180 PLSSSSSALK AFPARLELTK DLDRATLKLL EQFQANEQKL AANQAKALRR LAAAAAGPSY 240 RSTNFHLDQG YETGAELHIM NHVGWLRKNP QGDGGHRPSA VHDSAAQSFK VDFAELDKTK 300 PPPRLFALST NESQIQNPSA TAKSLEEINI GKEEAKRSID EPLYIDQEEL LFNTFVEAEF 360 RHVTVPPDHD QMPTLIAAAG DLPEEYLMLA NNFLSKAV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002989348.1 | 2e-52 | two-component response regulator ORR24 | ||||
TrEMBL | A0A0D6R466 | 1e-67 | A0A0D6R466_ARACU; Uncharacterized protein | ||||
STRING | EFJ09622 | 8e-52 | (Selaginella moellendorffii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP292 | 17 | 120 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-32 | response regulator 2 |