PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_12161g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family G2-like
Protein Properties Length: 398aa    MW: 44611.4 Da    PI: 10.109
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_12161g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like56.27.6e-1891133245
        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 
                    +r++Wt +LH++Fv+av+q  G ++A+Pk+ile+m+++gLt+e+
  MA_12161g0010  91 ARVHWTDQLHRKFVKAVDQT-GVDNAVPKRILEIMNIQGLTREN 133
                    69*****************9.********************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521723.02E-6153IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23005.1E-8156No hitNo description
PROSITE profilePS5011012.724139IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF466891.4E-1188141IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-1789141IPR009057Homeodomain-like
TIGRFAMsTIGR015573.9E-1591133IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MSANGDTNVV MRSITGGACN HLIKPIRMEE LRTIWQHVVR RHGQQNHRYK LEDNHRDLSG  60
HDRVSGESTA SKKRKHNSVQ FIQDINSLKT ARVHWTDQLH RKFVKAVDQT GVDNAVPKRI  120
LEIMNIQGLT RENKYRLYLK RLRGNIPEPR PVASFQAARD GKSGGTMQIR QRGKTSPSSS  180
PLSSSSSALK AFPARLELTK DLDRATLKLL EQFQANEQKL AANQAKALRR LAAAAAGPSY  240
RSTNFHLDQG YETGAELHIM NHVGWLRKNP QGDGGHRPSA VHDSAAQSFK VDFAELDKTK  300
PPPRLFALST NESQIQNPSA TAKSLEEINI GKEEAKRSID EPLYIDQEEL LFNTFVEAEF  360
RHVTVPPDHD QMPTLIAAAG DLPEEYLMLA NNFLSKAV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002989348.12e-52two-component response regulator ORR24
TrEMBLA0A0D6R4661e-67A0A0D6R466_ARACU; Uncharacterized protein
STRINGEFJ096228e-52(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP29217120
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-32response regulator 2