PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_120531g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family ERF
Protein Properties Length: 301aa    MW: 33134.3 Da    PI: 11.4344
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_120531g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98e-212373256
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +++GVr+++ +gr++AeIrd ++    ++r++lg+f+taeeAa+a+++a+++l+g+
  MA_120531g0010 23 HFRGVRRRP-WGRFAAEIRDpWK----KTRVWLGTFDTAEEAARAYDNAARALRGA 73
                    69*******.**********883....5*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.7E-312380IPR001471AP2/ERF domain
SMARTSM003803.0E-352386IPR001471AP2/ERF domain
CDDcd000181.82E-272380No hitNo description
SuperFamilySSF541719.81E-222380IPR016177DNA-binding domain
PROSITE profilePS5103222.8532380IPR001471AP2/ERF domain
PfamPF008479.4E-142372IPR001471AP2/ERF domain
PRINTSPR003676.0E-112435IPR001471AP2/ERF domain
PRINTSPR003676.0E-114662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016020Cellular Componentmembrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MAPRDELQNC GRGGGQTTAK EVHFRGVRRR PWGRFAAEIR DPWKKTRVWL GTFDTAEEAA  60
RAYDNAARAL RGAKAKTNFA TPRDNQSSSQ TSTVESWSSP KNVVVARSAP PSDASWRNFY  120
SAKYLDARVN GNANGNPGFK EAASAAAWKT IYVNRPVESR AIDLNISALD FGRVDDAATI  180
NARAHETMNG AVALRCPAVN PFDCASQVAL PGKLLLFEGI ASRPEKRQKT CVRSADEKLS  240
LGQQWSALNK GAGSGEEVET RNVQIRAPAV VRRSRRETSR ATAIRRRLLS LTTRLRRKPR  300
G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-20779171Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1293299RLRRKPR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00542DAPTransfer from AT5G44210Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1157640.0BT115764.1 Picea glauca clone GQ03705_M13 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K0M6X51e-175A0A0K0M6X5_PINTB; ERF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-25ERF domain protein 12