PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_118174g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

G2-like

Protein Properties

Length: 319aa MW: 34734.3 Da PI: 7.2521

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_118174g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.6	6.7e-34	246	300	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtpeLHe+Fvea+++LGG+e+AtPk +l+lm+v+gLt++hvkSHLQkYR+ MA_118174g0010 246 KPRLRWTPELHENFVEAINKLGGAERATPKGVLKLMNVEGLTIYHVKSHLQKYRI 300 79****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.9E-32	243	301	IPR009057	Homeodomain-like
PROSITE profile	PS51294	13.455	243	303	IPR017930	Myb domain
SuperFamily	SSF46689	2.51E-18	244	300	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.6E-25	246	301	IPR006447	Myb domain, plants
Pfam	PF00249	9.0E-10	248	299	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MGTPHAFRAA PAPDTEHSWN ACFIENNVPP SQHILPQVLS PDSRQANSFR TVSPVSSVSN 60 AGIGHGHMYS SASSFCTSLH HSSSAGSQRQ NQLNGLPFLP QPSKTLLPGS AVRSSQSGLS 120 YSSEGRNLRC QEAGTEHPLQ ELFNFSEELS EYSQRSQEKP ANARNVGQEQ SKQSDWPLWT 180 EHLVSDDLSD LLVGDPCINT AYQTAKSSAT ESTSHQLQSH QQFLPPSGGI HLPANSPASG 240 AGASNKPRLR WTPELHENFV EAINKLGGAE RATPKGVLKL MNVEGLTIYH VKSHLQKYRI 300 AKYISDYTDG KSNFSNSFS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-28	246	303	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-28	246	303	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-28	246	303	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-28	246	303	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-28	246	303	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-28	246	303	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-28	246	303	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-28	246	303	2	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EF085801	0.0	EF085801.1 Picea sitchensis clone WS02727_L10 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	B8LPK9	0.0	B8LPK9_PICSI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP78	17	262

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	6e-29	phosphate starvation response 1