PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_104763g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | C2H2 | ||||||||
Protein Properties | Length: 311aa MW: 35222.1 Da PI: 6.7918 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.7 | 0.00019 | 132 | 153 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C++ F ++ n++rH++tH MA_104763g0010 132 KCEKCSQQFCSSFNYRRHMQTH 153 8********************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50157 | 9.432 | 131 | 153 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MEQSESNRKV QESLLKFVAD AVGNKLLIAF SRYGKHPMQW GHWLDVLDDE NLNTFYNDVN 60 EEKLLPNESG QETIATVDHF SSDSNVEDPS PIDGIHSLII ARGVAAYAFA AANSNGLAGW 120 PLLGPSDIQI LKCEKCSQQF CSSFNYRRHM QTHRHVVNSK KEDLVIESGA ELRAYWDKLQ 180 PDKARDIVYF DNIMLEGIPG DSIIKYLTSV VRNSCILPLP KSFFTAGASL LGEDGGLKIK 240 NLVASIGFLV EHRLVKAWIT EKYVESLLLQ KQLLHEEEAM QRRKAEECER KRLKKTKRKE 300 LNKKDSTDVS N |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP3643 | 11 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25610.1 | 1e-27 | C2H2-like zinc finger protein |