PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_104763g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family C2H2
Protein Properties Length: 311aa    MW: 35222.1 Da    PI: 6.7918
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_104763g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019132153223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC++C++ F ++ n++rH++tH
  MA_104763g0010 132 KCEKCSQQFCSSFNYRRHMQTH 153
                     8********************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.432131153IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MEQSESNRKV QESLLKFVAD AVGNKLLIAF SRYGKHPMQW GHWLDVLDDE NLNTFYNDVN  60
EEKLLPNESG QETIATVDHF SSDSNVEDPS PIDGIHSLII ARGVAAYAFA AANSNGLAGW  120
PLLGPSDIQI LKCEKCSQQF CSSFNYRRHM QTHRHVVNSK KEDLVIESGA ELRAYWDKLQ  180
PDKARDIVYF DNIMLEGIPG DSIIKYLTSV VRNSCILPLP KSFFTAGASL LGEDGGLKIK  240
NLVASIGFLV EHRLVKAWIT EKYVESLLLQ KQLLHEEEAM QRRKAEECER KRLKKTKRKE  300
LNKKDSTDVS N
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP36431115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.11e-27C2H2-like zinc finger protein