PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10436384g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family Nin-like
Protein Properties Length: 611aa    MW: 66737.1 Da    PI: 6.9177
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10436384g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK53.35.5e-1739642752
            RWP-RK 27 vclTvLKriCRqyGIkRWPhRkiksl 52
                      vc+T+LKriCRq+GI+RWP+Rki+++
  MA_10436384g0010 39 VCPTTLKRICRQHGIARWPSRKINKV 64
                      ************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151912.889184IPR003035RWP-RK domain
PfamPF020422.4E-143764IPR003035RWP-RK domain
SuperFamilySSF542774.91E-24505597No hitNo description
SMARTSM006661.3E-22512594IPR000270PB1 domain
PROSITE profilePS5174521.554512594IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2404.4E-23513593No hitNo description
CDDcd064079.92E-32513593No hitNo description
PfamPF005642.1E-17513593IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    Send to blast
MISFSQRSFF TAIASLNTLP FQCLFLSKKH QAHDPLSSVC PTTLKRICRQ HGIARWPSRK  60
INKVNRSLKK LQGVIDSIQG ADGTLKLNAI ITDIMTVASM VQGLQMHSSI LPSQGSWAIS  120
WSSPEDFITR KAVPVRLGTA VPLEETTYQK ENLNNTPQTI LSTSLESSLS LKAASEAHGG  180
YDIHIQRPSA DGNISSSKND LLASHFRESA QQGSLAYMKG QLEKAMEILF WMAKDFITRK  240
AVPVGLGTAV PLEETTYQKE NLNNTPQTIL STGLESKLSL KAASEAHGGC DIHIQRPSAD  300
GNISSSKNDL LARHFRESAQ QGSLAYMKGQ LEVTEKDKNV QSVGFAGHEI VRNSFSAVAP  360
FGERHQPVTY RSDTSEFNSI PFTGKTRGFA EGIVENCQQV GHQFQGGKHD SRNLKIVQTG  420
ENLSLQDADC QVTSKHSDFF VLVNSKEPIV NSADEEVPQH EQNLPVFSGM TNSSAGSGSS  480
SSSLQGCDSS SPTVSGVDGL QRERHNKDEN SAITVKAKYK EDMVRFKLPL SSGFSELCDE  540
VAKRFKLIVG TFQLKYQDDD DEWVLLACNA DFHECIDVMN FSGGHAIRLL VRDLVSVVGS  600
SSGSCGDVLQ C
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1090970.0BT109097.1 Picea glauca clone GQ03204_J16 mRNA sequence.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP2991697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.27e-23Nin-like family protein