PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_10436090g0020

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

NF-YA

Protein Properties

Length: 229aa MW: 26425.3 Da PI: 10.3503

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_10436090g0020	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	30.3	1.4e-09	31	62	4	36
CBFB_NFYA 4 lYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 ++VNaKQy++IlkRR +R k e++++ +r MA_10436090g0020 31 VWVNAKQYRGILKRRLARLKWEQTRRK-RSQRE 62 89*********************8885.33333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51152	10.827	27	95	IPR001289	Nuclear transcription factor Y subunit A
Pfam	PF02045	2.6E-8	31	70	IPR001289	Nuclear transcription factor Y subunit A

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence Send to blast
MTMGQEILEL VETNDIGQVK IASSAKTEKW VWVNAKQYRG ILKRRLARLK WEQTRRKRSQ 60 RESTWVLRKK QHSNKSSLQV CGNKSKGKGK VIDDYALYSP TSTPLTWSSD LYVKELLKVK 120 KRLEAVEAKE LERDCTIHRI IAENQDLAEN NKVLKEQVSL LQEALRMGKT EWQHMKAEVQ 180 NMKKIAVENT EVMNAKPSQD KGKVVTQIDN NEETSKEERK GDSAKLSKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	42	57	KRRLARLKWEQTRRKR