PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10436051g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 354aa    MW: 39735 Da    PI: 9.1187
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10436051g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.82.2e-28181238359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       Dg++WrKYGqK  k+++ pr+YY+C+ a  Cpvkk+v+r+a+dp++v+++YegeH+h+
  MA_10436051g0010 181 DGCQWRKYGQKRTKNNPLPRAYYKCAWApACPVKKQVQRCAQDPTIVVTIYEGEHTHS 238
                       9*************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.5E-31168238IPR003657WRKY domain
SuperFamilySSF1182901.83E-25171239IPR003657WRKY domain
PROSITE profilePS5081124.558174240IPR003657WRKY domain
SMARTSM007741.5E-31179239IPR003657WRKY domain
PfamPF031062.9E-24181237IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MESNKIKMTI AVAEINRVNL ENQKLKSMLK NINSKYKYLQ KHIRSLVQQP ECVDGSQIFN  60
PDRQKQDVSC LGSMNVDSGK AVSHQSDQSS CCNERGEEKE KNANFMDDQK LPSKKRNINY  120
MQSEQIEKGI HSSMNESPCH HRESPNKKLQ VLSRGFGEQR AAAQMRIVAV RTRSEKSPRG  180
DGCQWRKYGQ KRTKNNPLPR AYYKCAWAPA CPVKKQVQRC AQDPTIVVTI YEGEHTHSLS  240
PLAIAAMHAG SSNQLTGEGT NTENLFADNQ FIPCIARVST SSTFPTITLD LTDNRPSRPG  300
LRLQPPHLAG SFQHSTLLSR DMGEVLDQNE LGNYSSVMQD YVPSVKADPL QLCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-19169239776Probable WRKY transcription factor 4
2lex_A3e-19169239776Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A482CVK90.0A0A482CVK9_9SPER; WRKY164
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.12e-40WRKY family protein