PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10435365g0020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 228aa    MW: 26639.2 Da    PI: 6.2569
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10435365g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.71.8e-0773119555
                       HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                          +E+ RR+r++s   +L +llP  +      Kl+     e++++YI++L+
  MA_10435365g0020  73 QTFAEQLRRKRMKSLCTQLESLLPAtP-----AKLDRCGLFEETINYIRKLE 119
                       5668*********************55.....9****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.60168118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.13E-568123No hitNo description
Gene3DG3DSA:4.10.280.103.1E-1169132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-1070130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-573119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-474124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    Send to blast
MASDWLFSHS LPDSRAVYSN VPQCDRQVDC RDTASRKRPS EVDLADLQEH NDLQENVWRD  60
VDRMMEFSSK ESQTFAEQLR RKRMKSLCTQ LESLLPATPA KLDRCGLFEE TINYIRKLEE  120
NIHRLKKKRE NLLAIQSGKT ANENTEIKVA VEFYGREAII SITSQRGPRQ MWKILEELES  180
HGLDVETSHL LPGEFFVLVF FHVNFRDYIS QDPAQIQTSL ECRLKLTY
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0859560.0EF085956.1 Picea sitchensis clone WS02715_B03 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA9NX911e-164A9NX91_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP12261548
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-06bHLH family protein