PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10435354g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 159aa MW: 17036 Da PI: 4.1208 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.2 | 8.4e-08 | 6 | 32 | 29 | 55 |
AP2 29 krfslgkfgtaeeAakaaiaarkkleg 55 ++++lg++ tae+Aa+a++aa l+g MA_10435354g0010 6 AKIWLGSYKTAEQAARAYDAAVYLLRG 32 789******************999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 13.34 | 1 | 40 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 8.6E-16 | 2 | 42 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.58E-14 | 2 | 42 | No hit | No description |
SMART | SM00380 | 1.2E-4 | 2 | 46 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-10 | 4 | 42 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
MPRSRAKIWL GSYKTAEQAA RAYDAAVYLL RGPAAQFNFP DSVPLIPPGS CLSRQQIQDA 60 AAKYASGELP STSPSLHSNI TEAPALPSPL QSTSVSEMES LSDQEAVWMS LFAGTNGAGC 120 LNLDRFPSID EALASDLLPT PQESYISGDP TQLWNFGED |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | D5ADJ9 | 2e-44 | D5ADJ9_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19210.1 | 2e-23 | ERF family protein |