PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10434976g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 453aa MW: 49196.5 Da PI: 6.4514 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.8 | 2.3e-33 | 278 | 335 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt a+C+vkk+vers edp++v++tYeg+H+h+ MA_10434976g0010 278 EDGYRWRKYGQKAVKNSPYPRSYYRCTNAKCSVKKRVERSFEDPSIVITTYEGQHTHQ 335 8********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.7E-35 | 262 | 337 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.92E-29 | 269 | 337 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.158 | 272 | 337 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.0E-39 | 277 | 336 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.3E-26 | 278 | 335 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence Send to blast |
MAGEQSIPKT QVQERQDAMW KHLAGEISSG PFVEHQPGKQ TRDSGSWNIS PAPYSDNRDL 60 LFQSMSAAAN MNMMNTVLLP ESSSHSGFFG SSSELWSGVE GSDRQTGLPM ISAGLAEFME 120 IDAGFDSPYM SFTECLQAGL QMDAVDYSRS LGQTASGPQG AAPFDFSCPL TAEERAGAGA 180 GSGHIGDTPN VPTTPVSSIS SSSTEAIEDQ EPSRLGTVAS TSGAKGGPAV PQAPEDQESL 240 DKPSPQSKKL NKPRKKGQKR NREPRFAFMT KSDVDHLEDG YRWRKYGQKA VKNSPYPRSY 300 YRCTNAKCSV KKRVERSFED PSIVITTYEG QHTHQSPALL RSSGGEASHI AERNTTNSLP 360 PFTQPPLSFS LQMMAPRTTA AASFDHHMQQ QQQQQEQETD LQASQRHMIS AVPPPHPALL 420 QQRSQTQTAA AVPNPTDHGL LEDIVPSGMR KLS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-24 | 270 | 338 | 10 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 1e-24 | 270 | 338 | 10 | 78 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00067 | PBM | Transfer from AT1G69310 | Download |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU269773 | 3e-50 | EU269773.1 Pinus monticola WRKY transcription factor PmWRKY125 mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0D6QXU1 | 1e-105 | A0A0D6QXU1_ARACU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 3e-48 | WRKY DNA-binding protein 57 |