PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10434976g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 453aa    MW: 49196.5 Da    PI: 6.4514
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10434976g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.82.3e-33278335259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dgy+WrKYGqK vk+s++prsYYrCt a+C+vkk+vers edp++v++tYeg+H+h+
  MA_10434976g0010 278 EDGYRWRKYGQKAVKNSPYPRSYYRCTNAKCSVKKRVERSFEDPSIVITTYEGQHTHQ 335
                       8********************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-35262337IPR003657WRKY domain
SuperFamilySSF1182903.92E-29269337IPR003657WRKY domain
PROSITE profilePS5081131.158272337IPR003657WRKY domain
SMARTSM007741.0E-39277336IPR003657WRKY domain
PfamPF031062.3E-26278335IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MAGEQSIPKT QVQERQDAMW KHLAGEISSG PFVEHQPGKQ TRDSGSWNIS PAPYSDNRDL  60
LFQSMSAAAN MNMMNTVLLP ESSSHSGFFG SSSELWSGVE GSDRQTGLPM ISAGLAEFME  120
IDAGFDSPYM SFTECLQAGL QMDAVDYSRS LGQTASGPQG AAPFDFSCPL TAEERAGAGA  180
GSGHIGDTPN VPTTPVSSIS SSSTEAIEDQ EPSRLGTVAS TSGAKGGPAV PQAPEDQESL  240
DKPSPQSKKL NKPRKKGQKR NREPRFAFMT KSDVDHLEDG YRWRKYGQKA VKNSPYPRSY  300
YRCTNAKCSV KKRVERSFED PSIVITTYEG QHTHQSPALL RSSGGEASHI AERNTTNSLP  360
PFTQPPLSFS LQMMAPRTTA AASFDHHMQQ QQQQQEQETD LQASQRHMIS AVPPPHPALL  420
QQRSQTQTAA AVPNPTDHGL LEDIVPSGMR KLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-242703381078Probable WRKY transcription factor 4
2lex_A1e-242703381078Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00067PBMTransfer from AT1G69310Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU2697733e-50EU269773.1 Pinus monticola WRKY transcription factor PmWRKY125 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D6QXU11e-105A0A0D6QXU1_ARACU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-48WRKY DNA-binding protein 57