PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10434651g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 631aa    MW: 68339.4 Da    PI: 7.4162
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10434651g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.46.2e-33286342259
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       dDgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ d++v+ei+Y+g+Hnh+
  MA_10434651g0010 286 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPKCPVKKKVERSH-DGQVTEIIYKGDHNHD 342
                       8****************************************.***************7 PP
2WRKY102.72.1e-32485543159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vkg+++prsYY+Ct  gC+v+k+ver+++d k+v++tYeg+Hnh+
  MA_10434651g0010 485 LDDGYRWRKYGQKVVKGNPHPRSYYKCTNVGCSVRKHVERASNDIKAVITTYEGKHNHD 543
                       59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.594280344IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.8E-29281342IPR003657WRKY domain
SuperFamilySSF1182902.62E-25282342IPR003657WRKY domain
SMARTSM007748.9E-37285343IPR003657WRKY domain
PfamPF031061.3E-25286342IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-36470545IPR003657WRKY domain
SuperFamilySSF1182908.76E-29477545IPR003657WRKY domain
PROSITE profilePS5081137.929480545IPR003657WRKY domain
SMARTSM007741.2E-37485544IPR003657WRKY domain
PfamPF031064.8E-25486543IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:1900150Biological Processregulation of defense response to fungus
GO:1900425Biological Processnegative regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    Send to blast
MEGKESATTV GDRRGGALIW KPSSSSSSSS RPSLSLPLRP SSIEEHALSI KRSPGPMTTL  60
FSSLMSDHVD PYPDPDSECR SFSQLLAGAM TSPNAQPTAS AMMMMMMYSP SETTLGAQNN  120
TFDEGGAGGL GNGNGRGSRG FKSSTPISIP IPMSPLFNIS PGFSPTMLLD SPGFLSGGQG  180
SFGISHQQVL AQVQAQAQVQ ALPQMQVQAS SYPPLISSTS TALMPVQMEY TAGADGNTYE  240
VSCQQKMPAQ PESNKTIGRP KLVSQSTEPN QRSLPPVYPV AERPSDDGYN WRKYGQKQVK  300
GSEYPRSYYK CTHPKCPVKK KVERSHDGQV TEIIYKGDHN HDRKIQSSRR MANSVQQHLS  360
DQDGRYAARG SDDRNESLDS KTDGSIQLFS GDPRGRSGIN TNILDPSTSA REYDVGQRSA  420
EQSSGSSDDG EDDDQASRAD NADDEDEESE AKRRKKENIK EIVAPLRTIK EPRVVVQTTS  480
DVDILDDGYR WRKYGQKVVK GNPHPRSYYK CTNVGCSVRK HVERASNDIK AVITTYEGKH  540
NHDVPAPRNS SHDSAGSGSQ FHAGNNAVTS SSLPKSSAIS LLEQQAGNCP SSSGWTLGSR  600
TEGAIPLRTV RPKEEPDTTS VPTGLYHNVG Q
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-37286546878Probable WRKY transcription factor 4
2lex_A2e-37286546878Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU2697650.0EU269765.1 Pinus monticola WRKY transcription factor PmWRKY117 mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0C9RV740.0A0A0C9RV74_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_11327_2770 transcribed RNA sequence
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.16e-45WRKY DNA-binding protein 33