PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_10433095g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

NAC

Protein Properties

Length: 305aa MW: 34635.2 Da PI: 5.4509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_10433095g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	123.9	1.3e-38	20	147	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +pGfrF+Pt+eel+ +yL+k+v+ + l+++++i+++d+y+++Pw+Lp +++ +ek+w+fF++r + ++ +r+nr t sg+ katg+dk+v MA_10433095g0010 20 APGFRFSPTEEELLGFYLNKRVQYGHpLKIDTIIPTLDLYRYDPWELPgLAHYVGEKQWFFFVPRVQGNS-CSRPNRLTVSGFCKATGSDKAV 111 59*****************997776999889***********66777899*****99875.68**************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + +glkktLvfykg+++ g++tdW+m+eyrl MA_10433095g0010 112 RNELLHCIGLKKTLVFYKGKTSGGQRTDWIMNEYRL 147 99999***************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	44.695	19	169	IPR003441	NAC domain
SuperFamily	SSF101941	8.24E-41	20	169	IPR003441	NAC domain
Pfam	PF02365	1.2E-20	21	147	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence Send to blast
MAMLEEICND GGVPGELMDA PGFRFSPTEE ELLGFYLNKR VQYGHPLKID TIIPTLDLYR 60 YDPWELPGLA HYVGEKQWFF FVPRVQGNSC SRPNRLTVSG FCKATGSDKA VRNELLHCIG 120 LKKTLVFYKG KTSGGQRTDW IMNEYRLPDF NSSTAKKNMD MVLCRIYRKA ASRKSMDQRG 180 NPNHVEKEDP VFSAGDEYEQ NLSNAFTLNG SCQLSNAMRE TRGSSLHYQK QEGVCSSDLS 240 KTNDEDSLFE CLERIMFCEE TKACEPPRLE LPTLSMDCFF GHEVIPSPWA DNINAWTPYA 300 LLSTP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	3e-36	16	172	14	168	NO APICAL MERISTEM PROTEIN
1ut4_B	3e-36	16	172	14	168	NO APICAL MERISTEM PROTEIN
1ut7_A	3e-36	16	172	14	168	NO APICAL MERISTEM PROTEIN
1ut7_B	3e-36	16	172	14	168	NO APICAL MERISTEM PROTEIN
3swm_A	3e-36	16	172	17	171	NAC domain-containing protein 19
3swm_B	3e-36	16	172	17	171	NAC domain-containing protein 19
3swm_C	3e-36	16	172	17	171	NAC domain-containing protein 19
3swm_D	3e-36	16	172	17	171	NAC domain-containing protein 19
3swp_A	3e-36	16	172	17	171	NAC domain-containing protein 19
3swp_B	3e-36	16	172	17	171	NAC domain-containing protein 19
3swp_C	3e-36	16	172	17	171	NAC domain-containing protein 19
3swp_D	3e-36	16	172	17	171	NAC domain-containing protein 19
4dul_A	3e-36	16	172	14	168	NAC domain-containing protein 19
4dul_B	3e-36	16	172	14	168	NAC domain-containing protein 19
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Swissprot	Q10S65	5e-53	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A075M5N5	1e-118	A0A075M5N5_9SPER; NAC domain protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP17	15	800

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	9e-52	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]