PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10432919g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bHLH | ||||||||
Protein Properties | Length: 311aa MW: 34723.3 Da PI: 8.9372 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.1 | 5.8e-12 | 235 | 282 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + sk + Ka++Le+ ++Y++sLq MA_10432919g0010 235 SHSLAERVRREKINERLRFLKDLVPGC----SKTVGKAAMLEEIINYVQSLQ 282 8*************************9....788*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.52E-11 | 229 | 286 | No hit | No description |
SuperFamily | SSF47459 | 5.37E-18 | 229 | 300 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.139 | 231 | 281 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.3E-17 | 231 | 295 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.9E-9 | 235 | 282 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.4E-10 | 237 | 287 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MDAALPYLSA KDDYSLFNMY KHTALKTYSP FLPNQDFLNP CSHGDMENIN SFITRTKPHA 60 SLANTPTHSS SAAFDSHQGL KQERGISSED ARIAIFSDLC DINGFPVNTI VTKDKDEAEF 120 LIPSDGCIHG CFERHCNNCT DGNIWASSTS AQSSVALTDL DIRKGKKRSS VRNEWPRIKN 180 TPKEDQTKRP CCSKKSKAAI TQKTAESPAN AKKIKAEPPK DFIHVRARRG QATDSHSLAE 240 RVRREKINER LRFLKDLVPG CSKTVGKAAM LEEIINYVQS LQRQIEVLSM KLAAVSPRYD 300 FSVELNTSAK E |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | XP_006421053.1 | 3e-44 | (Citrus clementina) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP58 | 16 | 313 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68920.2 | 1e-43 | bHLH family protein |