PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10432914g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 462aa    MW: 49715.8 Da    PI: 5.1244
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10432914g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-30261319259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+
  MA_10432914g0010 261 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSDHNHP 319
                       699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081133.281255321IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-30257321IPR003657WRKY domain
SuperFamilySSF1182907.32E-26259321IPR003657WRKY domain
SMARTSM007748.6E-37260320IPR003657WRKY domain
PfamPF031062.3E-25262319IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MEESDDGGLE AVVRGGRGYN NIRMNNNPYN WQAPPALGFD AGSIENAGVE EGLVTGSISM  60
IQMGQGDSNS EMNTFANLLR TGMACTRPPA MDLQELCSPF YNGNRNLLRS ASSSSKLLFE  120
NKEVQTTSSI FATDSPTASK FSFVEKKPGD PVKAEPETEF GKLTASKSVE AVSPASLSSL  180
APEPDSKPPL KVESASTKEG DCSSLSIQVR TDLAMENGSS SQTTGSAKGQ GSKRRKPQQK  240
RIVCVPAAGG SNRPSGEGLP SDLWAWRKYG QKPIKGSPYP RGYYRCSSSK GCSARKQVER  300
SRTDPNMLVI TYTSDHNHPW PTHRNALAGS TRQAEKVNTS EKENSDQMPG NSCFPENKKT  360
KTTPFSAVID SSEATVSEGL QQAGAAGSNS SVQAPDSAVP QNDPVAINNL LTDAHHHEED  420
FFAELGELPE SLNVFPRHFD DDKSDDEAAS SVLDPFNLFT WS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-23240322680Disease resistance protein RRS1
5w3x_D3e-23240322680Disease resistance protein RRS1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1128590.0BT112859.1 Picea glauca clone GQ03321_N20 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006853288.23e-67probable WRKY transcription factor 35
TrEMBLA0A3S3MT184e-68A0A3S3MT18_9MAGN; Putative WRKY transcription factor 14
STRINGERN147559e-67(Amborella trichopoda)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-58WRKY DNA-binding protein 35