PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MA_10431997g0010

Organism

Picea abies

Taxonomic ID

3329

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea

Family

NAC

Protein Properties

Length: 940aa MW: 106804 Da PI: 5.5752

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MA_10431997g0010	genome	ConGenIE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	55.1	2.6e-17	3	68	1	64
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekew.yfFskr 64 lpp frFhPtdeelv +yLk+kv+g k+el e+i+evdiyk ePwdLp k + +++ ew F ++ MA_10431997g0010 3 LPPRFRFHPTDEELVAYYLKRKVHGWKIEL-EIIPEVDIYKREPWDLPeKsFLPGKDLEWkKVFLQA 68 6899************************.99************94333333455775344443 PP
2	NAM	180	6.1e-56	211	338	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtdeelv +yLk+kv+g k+el e+i+evdiyk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++ MA_10431997g0010 211 LPPGFRFHPTDEELVAYYLKRKVHGWKIEL-EIIPEVDIYKCEPWDLPeKsFLPGKDLEWYFFSPRDRKYPNGSRTNRATEAGYWKATGKDRK 302 79**************************.99**********95334444667******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s +++ +g+kktLvfy+grap+g++tdWvmheyrl MA_10431997g0010 303 VIS-HTRPIGMKKTLVFYTGRAPHGSRTDWVMHEYRL 338 .999***************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.62E-18	2	68	IPR003441	NAC domain
PROSITE profile	PS51005	17.688	3	194	IPR003441	NAC domain
Pfam	PF02365	1.4E-7	4	82	IPR003441	NAC domain
SuperFamily	SSF101941	7.19E-66	204	361	IPR003441	NAC domain
PROSITE profile	PS51005	61.745	211	361	IPR003441	NAC domain
Pfam	PF02365	2.1E-29	212	338	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 940 aa Download sequence Send to blast
MSLPPRFRFH PTDEELVAYY LKRKVHGWKI ELEIIPEVDI YKREPWDLPE KSFLPGKDLE 60 WKKVFLQAHR YDVWHSVVIG YNATKKPKTT TKKKMKGNHK IAMDFILEGF HDSVKDKVGM 120 CSSPKEIFDK LHNIFFEESP ITEPDNAKED ADIEQEERCS SCQADSEEEE CEINRTDFGE 180 KGRRNRSVCR VSFVETLKFR RDLVGMAPMS LPPGFRFHPT DEELVAYYLK RKVHGWKIEL 240 EIIPEVDIYK CEPWDLPEKS FLPGKDLEWY FFSPRDRKYP NGSRTNRATE AGYWKATGKD 300 RKVISHTRPI GMKKTLVFYT GRAPHGSRTD WVMHEYRLDE KECEASATLQ EAYALCRVFK 360 KSGPGPRIGE QYGAPVENDF SCDMVNSGNK NMLLSVEEQS EEKPSPLSQG EEEDQNNSRE 420 TSSEITNHMT LDDRALKRRL QSVACDTAKC SSPSLNESII HPKVEHNEFS CPPLDVGDFP 480 HMRACLNFSD SKNLSAYLLD EQTLSSSQEE QILEQLYRDA QTSQENNYVN QFINSNVADM 540 LNDEDYLQLD DFVSGWNIEN DHKKANNSDG EEEGGLFPLT SFVSPDYSSE GFYDRPEQLL 600 FFNRFMRQNS NPETIKQLED SIPKTLSRRL SSSIDGCKLQ FSRGLVPNDY WDPGFSDVSI 660 SPPGNKTQPY NLPGGGGGLA HEHYVDQFPS DSFQFYETLD HACHGLLSTP AKSFIGGLIL 720 NEKPSEVLEM SVNLPDNDYI QQGSSVSSQK HGVEKYNQKH LQQREIVKVP FENMIKLSKV 780 SVHEPYRGTS RMVQFLSSCK TKAVEYLASL KSYKSTLVSE ITVCRDISTA AASAPVMPLP 840 LTRRFSMEYS GELNLSTCGL RHRALKSGEL SASNNVLSDG DGDKFVDQIA DKLCDSDNKS 900 IGMINLHEPC GILNGLFHPG SKRLFVAFNG SSFALICGLL

Sequence ? help Back to Top

Protein Sequence Length: 940 aa Download sequence Send to blast

MSLPPRFRFH PTDEELVAYY LKRKVHGWKI ELEIIPEVDI YKREPWDLPE KSFLPGKDLE  60
WKKVFLQAHR YDVWHSVVIG YNATKKPKTT TKKKMKGNHK IAMDFILEGF HDSVKDKVGM  120
CSSPKEIFDK LHNIFFEESP ITEPDNAKED ADIEQEERCS SCQADSEEEE CEINRTDFGE  180
KGRRNRSVCR VSFVETLKFR RDLVGMAPMS LPPGFRFHPT DEELVAYYLK RKVHGWKIEL  240
EIIPEVDIYK CEPWDLPEKS FLPGKDLEWY FFSPRDRKYP NGSRTNRATE AGYWKATGKD  300
RKVISHTRPI GMKKTLVFYT GRAPHGSRTD WVMHEYRLDE KECEASATLQ EAYALCRVFK  360
KSGPGPRIGE QYGAPVENDF SCDMVNSGNK NMLLSVEEQS EEKPSPLSQG EEEDQNNSRE  420
TSSEITNHMT LDDRALKRRL QSVACDTAKC SSPSLNESII HPKVEHNEFS CPPLDVGDFP  480
HMRACLNFSD SKNLSAYLLD EQTLSSSQEE QILEQLYRDA QTSQENNYVN QFINSNVADM  540
LNDEDYLQLD DFVSGWNIEN DHKKANNSDG EEEGGLFPLT SFVSPDYSSE GFYDRPEQLL  600
FFNRFMRQNS NPETIKQLED SIPKTLSRRL SSSIDGCKLQ FSRGLVPNDY WDPGFSDVSI  660
SPPGNKTQPY NLPGGGGGLA HEHYVDQFPS DSFQFYETLD HACHGLLSTP AKSFIGGLIL  720
NEKPSEVLEM SVNLPDNDYI QQGSSVSSQK HGVEKYNQKH LQQREIVKVP FENMIKLSKV  780
SVHEPYRGTS RMVQFLSSCK TKAVEYLASL KSYKSTLVSE ITVCRDISTA AASAPVMPLP  840
LTRRFSMEYS GELNLSTCGL RHRALKSGEL SASNNVLSDG DGDKFVDQIA DKLCDSDNKS  900
IGMINLHEPC GILNGLFHPG SKRLFVAFNG SSFALICGLL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	6e-55	1	361	1	168	Stress-induced transcription factor NAC1

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	432	438	DRALKRR
2	433	438	RALKRR

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00212	DAP	Transfer from AT1G65910	Download

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP17	15	800

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	5e-91	NAC domain containing protein 28