PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10431706g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | ERF | ||||||||
Protein Properties | Length: 176aa MW: 19172.4 Da PI: 9.5745 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.3 | 5.8e-11 | 2 | 29 | 28 | 55 |
AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55 ++r++lg+f+taeeAa+a++ a+++l+g MA_10431706g0010 2 KTRVWLGTFDTAEEAARAYDSAARNLRG 29 589***********************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.12E-17 | 1 | 36 | No hit | No description |
PROSITE profile | PS51032 | 13.828 | 1 | 37 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.7E-7 | 1 | 29 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-12 | 1 | 38 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 3.5E-9 | 1 | 43 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.7E-18 | 1 | 37 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence Send to blast |
KKTRVWLGTF DTAEEAARAY DSAARNLRGP KAKTNFVLSP IHRDSSRSRS AALLSDSVTR 60 AASGQIQDQR PLRPYFYSNQ DPAIISISCA PSALLSPVDN DQGASSCVTG GPPSQSPALE 120 NQAVPYKKRK LLFGIDLMRS RNSQQQQNDA EICNSSRRQA PFLLDLNLPP AANDVD |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HM202230 | 3e-32 | HM202230.1 Picea sitchensis isolate CR100 ethylene-responsive element binding factor-like protein mRNA, complete cds. | |||
GenBank | HM202236 | 3e-32 | HM202236.1 Picea sitchensis isolate CR400 ethylene-responsive element binding factor-like protein mRNA, complete cds. | |||
GenBank | HM202237 | 3e-32 | HM202237.1 Picea sitchensis isolate CR401 ethylene-responsive element binding factor-like protein mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A9NMP5 | 1e-54 | A9NMP5_PICSI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP6 | 16 | 1718 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 1e-07 | ethylene response factor 7 |