PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10431189g0020 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | NAC | ||||||||
Protein Properties | Length: 373aa MW: 42941.9 Da PI: 9.0426 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 159.1 | 1.8e-49 | 29 | 162 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 l+pGfrFhPt+eel+++yL++kvegk++++ e i +vd+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+tksgyWkat MA_10431189g0020 29 LMPGFRFHPTEEELLDFYLRRKVEGKHFNI-ELIISVDLYRYDPWELPAcilsftaLASVGEKEWFFYVQRDRKYRNGDRPNRVTKSGYWKAT 120 689***************************.899**************757777653344999****************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g d+ v ++ ++ +glkktLvfykg+apkg++t+W+m+eyrl MA_10431189g0020 121 GADRMVRNEVSRCIGLKKTLVFYKGKAPKGKRTSWIMNEYRL 162 ********9999****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.54E-50 | 25 | 169 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 51.087 | 29 | 186 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-24 | 31 | 162 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence Send to blast |
MSLPKSSCSM KDKDWKADEG IFKHDQDVLM PGFRFHPTEE ELLDFYLRRK VEGKHFNIEL 60 IISVDLYRYD PWELPACILS FTALASVGEK EWFFYVQRDR KYRNGDRPNR VTKSGYWKAT 120 GADRMVRNEV SRCIGLKKTL VFYKGKAPKG KRTSWIMNEY RLPQLETQRS QKNGIHIYVL 180 TSIYFGRTNS PFAVSTKSQK DPRKDARKQR NVITEQKIMK CRSGACSNPR TTAESCNFEI 240 KRGSTDEAKL EEMATDIKIM PKSIIEEERY LGNMEYGVPY QWENIRGHIY SEGGNVWSTV 300 GRPISLNEDL GPSLTTCLMC SRAPDQLAMA EDLYNHNQSN LVLTKTLTSG ACLPTCSDKL 360 WEWNRNNGNG PSC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-49 | 26 | 184 | 14 | 163 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-49 | 26 | 184 | 14 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-49 | 26 | 184 | 14 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-49 | 26 | 184 | 14 | 163 | NO APICAL MERISTEM PROTEIN |
3swm_A | 8e-49 | 26 | 184 | 17 | 166 | NAC domain-containing protein 19 |
3swm_B | 8e-49 | 26 | 184 | 17 | 166 | NAC domain-containing protein 19 |
3swm_C | 8e-49 | 26 | 184 | 17 | 166 | NAC domain-containing protein 19 |
3swm_D | 8e-49 | 26 | 184 | 17 | 166 | NAC domain-containing protein 19 |
3swp_A | 8e-49 | 26 | 184 | 17 | 166 | NAC domain-containing protein 19 |
3swp_B | 8e-49 | 26 | 184 | 17 | 166 | NAC domain-containing protein 19 |
3swp_C | 8e-49 | 26 | 184 | 17 | 166 | NAC domain-containing protein 19 |
3swp_D | 8e-49 | 26 | 184 | 17 | 166 | NAC domain-containing protein 19 |
4dul_A | 7e-49 | 26 | 184 | 14 | 163 | NAC domain-containing protein 19 |
4dul_B | 7e-49 | 26 | 184 | 14 | 163 | NAC domain-containing protein 19 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP17 | 15 | 800 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.1 | 4e-80 | NAC domain containing protein 35 |