PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10431189g0020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family NAC
Protein Properties Length: 373aa    MW: 42941.9 Da    PI: 9.0426
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10431189g0020genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.11.8e-49291621128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                       l+pGfrFhPt+eel+++yL++kvegk++++ e i +vd+y+++Pw+Lp+        ++ +ekew+f+++rd+ky++g+r+nr+tksgyWkat
  MA_10431189g0020  29 LMPGFRFHPTEEELLDFYLRRKVEGKHFNI-ELIISVDLYRYDPWELPAcilsftaLASVGEKEWFFYVQRDRKYRNGDRPNRVTKSGYWKAT 120
                       689***************************.899**************757777653344999****************************** PP

               NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       g d+ v ++ ++ +glkktLvfykg+apkg++t+W+m+eyrl
  MA_10431189g0020 121 GADRMVRNEVSRCIGLKKTLVFYKGKAPKGKRTSWIMNEYRL 162
                       ********9999****************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.54E-5025169IPR003441NAC domain
PROSITE profilePS5100551.08729186IPR003441NAC domain
PfamPF023651.2E-2431162IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MSLPKSSCSM KDKDWKADEG IFKHDQDVLM PGFRFHPTEE ELLDFYLRRK VEGKHFNIEL  60
IISVDLYRYD PWELPACILS FTALASVGEK EWFFYVQRDR KYRNGDRPNR VTKSGYWKAT  120
GADRMVRNEV SRCIGLKKTL VFYKGKAPKG KRTSWIMNEY RLPQLETQRS QKNGIHIYVL  180
TSIYFGRTNS PFAVSTKSQK DPRKDARKQR NVITEQKIMK CRSGACSNPR TTAESCNFEI  240
KRGSTDEAKL EEMATDIKIM PKSIIEEERY LGNMEYGVPY QWENIRGHIY SEGGNVWSTV  300
GRPISLNEDL GPSLTTCLMC SRAPDQLAMA EDLYNHNQSN LVLTKTLTSG ACLPTCSDKL  360
WEWNRNNGNG PSC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-492618414163NO APICAL MERISTEM PROTEIN
1ut4_B7e-492618414163NO APICAL MERISTEM PROTEIN
1ut7_A7e-492618414163NO APICAL MERISTEM PROTEIN
1ut7_B7e-492618414163NO APICAL MERISTEM PROTEIN
3swm_A8e-492618417166NAC domain-containing protein 19
3swm_B8e-492618417166NAC domain-containing protein 19
3swm_C8e-492618417166NAC domain-containing protein 19
3swm_D8e-492618417166NAC domain-containing protein 19
3swp_A8e-492618417166NAC domain-containing protein 19
3swp_B8e-492618417166NAC domain-containing protein 19
3swp_C8e-492618417166NAC domain-containing protein 19
3swp_D8e-492618417166NAC domain-containing protein 19
4dul_A7e-492618414163NAC domain-containing protein 19
4dul_B7e-492618414163NAC domain-containing protein 19
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1715800
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.14e-80NAC domain containing protein 35