PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MA_10426942g0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | WRKY | ||||||||
Protein Properties | Length: 256aa MW: 28672.4 Da PI: 7.9029 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.9 | 1e-28 | 153 | 211 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG K k+ ++prsYYrCt +gC+vkk+ver+a+dp +++ tYeg+Hnhe MA_10426942g0010 153 VDDGYKWRKYGTKILKSRPHPRSYYRCTESGCSVKKRVEREATDPGLLVSTYEGTHNHE 211 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 9.9E-30 | 141 | 213 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.71E-26 | 146 | 213 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.044 | 148 | 213 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.9E-29 | 153 | 212 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.7E-24 | 154 | 211 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
METWKNRDHF HRSLDNPQCV DPCLDPINSL FCDNHIAANP YNATFSQELN IYPHDVPEPK 60 IWKDAWSDEF VVDKNGDCGL PVNEVKTIEA MACKSPAPQF FPNLEEQLSG DISGSKKSVK 120 AGEIADGSKR RKIRKSEKGP VCVFKTRSES NTVDDGYKWR KYGTKILKSR PHPRSYYRCT 180 ESGCSVKKRV EREATDPGLL VSTYEGTHNH ECPSVIYYIG KPIILQQPPG SNPAIILVNP 240 GVCSEAVTKF ASQQAL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 8e-26 | 144 | 214 | 8 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 8e-26 | 144 | 214 | 8 | 78 | Probable WRKY transcription factor 4 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41570.1 | 7e-31 | WRKY DNA-binding protein 24 |