PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10426628g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family MYB_related
Protein Properties Length: 98aa    MW: 10746.1 Da    PI: 10.4318
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10426628g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.54.1e-106490127
                      TSSS-HHHHHHHHHHHHHTTTT-HHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktI 27
                      +g WT+eEde+l +av  + g++Wk+I
  MA_10426628g0010 64 KGGWTEEEDEILRRAVDAHKGKNWKKI 90
                      688***********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.6035998IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.3E-96190IPR009057Homeodomain-like
SuperFamilySSF466891.36E-66192IPR009057Homeodomain-like
PfamPF002491.6E-76490IPR001005SANT/Myb domain
CDDcd001671.80E-66790No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MSGHATTSFD KRKMAGVKNN RTDCSKDKKS GASSSSLSDC CESALQRLPP VQGRTSGPTR  60
RSSKGGWTEE EDEILRRAVD AHKGKNWKKI GLFSYTPL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024395732.16e-18transcription factor MYB3R-1-like isoform X1
RefseqXP_024395733.16e-18transcription factor MYB3R-1-like isoform X2
TrEMBLA0A118J4F83e-18A0A118J4F8_CYNCS; Homeodomain-like protein
TrEMBLA0A176VVE14e-18A0A176VVE1_MARPO; Uncharacterized protein
TrEMBLA0A2R6X4U04e-18A0A2R6X4U0_MARPO; Uncharacterized protein
STRINGEFJ276641e-16(Selaginella moellendorffii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5171784
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.28e-16myb domain protein 3r-4