PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10426153g0010
Organism
Picea abies
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family C2H2
Protein Properties Length: 438aa    MW: 48080.7 Da    PI: 8.1893
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10426153g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-05191214123
                       EEETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                       + C+ Cg+ F++ + L++H+   H
  MA_10426153g0010 191 FACSSCGQIFTNTDALEQHQAIkH 214
                       78******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.596191219IPR007087Zinc finger, C2H2
PROSITE patternPS000280193214IPR007087Zinc finger, C2H2
SuperFamilySSF563992.88E-22216436No hitNo description
Gene3DG3DSA:3.90.228.103.5E-19218436IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MGSYNTAIFL QGSQLALGVM ILHIAGFFLV PDVIPATSLT PTKKKRGGPP SSPSPPHHVS  60
SWALRFKKFV TCMFDGGEVH EPASRSVVIS KGSYQRRSWI DCSGSGLCNI RDVAHGNTRV  120
MHRSEGEISS HESGSCACIQ DDQSNHDHHH VSGSSSLRFS RGMHLTRWSG CYECRMIVDP  180
IQAFSFPATI FACSSCGQIF TNTDALEQHQ AIKHAVSELG EDDSARTVVE IIFQSSWLKK  240
ENPICKIERI LKIHNSQKTI NKFEEYRDMV KAKANRLPKK HPRSIADGNE LLRFHCTTFT  300
CSLGMNGCSS LCNLPYCSIC NVIKNGFSSS PPKPEMEGNG SGIYTTASSG KAHDNTQLLL  360
EEEDGELASK GKGKRKRAML VCRVIAGRVQ KSQDPDDFVA GGFDSIAGQA GLYSNLEELL  420
VYNPRAVLPC FVVIYQTS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB8LQN91e-116B8LQN9_PICSI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6611439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-101C2H2-like zinc finger protein